Browse of TCMCG006C22378 protein

CDS

Accession Number	TCMCG006C22378
gbkey	CDS
Protein Id	XP_022554262.1
Location	complement(join(5218631..5218672,5218769..5218855,5218956..5219030,5219113..5219229,5219327..5219410,5219552..5219617,5219764..5219829,5220437..5220508,5220585..5220686,5220771..5220948,5221116..5221171,5221484..5221591,5221669..5221737,5221833..5221941,5222148..5222236,5222340..5222414,5222732..5222854,5223058..5223177,5223249..5223329,5223404..5223550,5223639..5223717,5224336..5224410,5224702..5224811,5224909..5225007,5225380..5225495,5225582..5225690,5225775..5225993,5226095..5226360,5226681..5226838,5226933..5227083,5227216..5227282,5227571..5227600))
Gene	LOC106426392
GeneID	106426392
Organism	Brassica napus

Protein

Length	1114aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_022698541.1
Definition	ubiquitin carboxyl-terminal hydrolase 12-like isoform X2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	O
Description	Belongs to the peptidase C19 family
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko01002        [VIEW IN KEGG] ko04121        [VIEW IN KEGG]
KEGG_ko	ko:K11838        [VIEW IN KEGG]
EC	3.4.19.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko04068        [VIEW IN KEGG] ko05168        [VIEW IN KEGG] ko05169        [VIEW IN KEGG] ko05203        [VIEW IN KEGG] map04068        [VIEW IN KEGG] map05168        [VIEW IN KEGG] map05169        [VIEW IN KEGG] map05203        [VIEW IN KEGG]
GOs	GO:0001101        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004843        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006508        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007154        [VIEW IN EMBL-EBI] GO:0007165        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008233        [VIEW IN EMBL-EBI] GO:0008234        [VIEW IN EMBL-EBI] GO:0009719        [VIEW IN EMBL-EBI] GO:0009725        [VIEW IN EMBL-EBI] GO:0009753        [VIEW IN EMBL-EBI] GO:0009755        [VIEW IN EMBL-EBI] GO:0009867        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010033        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0019538        [VIEW IN EMBL-EBI] GO:0019783        [VIEW IN EMBL-EBI] GO:0023052        [VIEW IN EMBL-EBI] GO:0032870        [VIEW IN EMBL-EBI] GO:0036459        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0070011        [VIEW IN EMBL-EBI] GO:0070887        [VIEW IN EMBL-EBI] GO:0071229        [VIEW IN EMBL-EBI] GO:0071310        [VIEW IN EMBL-EBI] GO:0071395        [VIEW IN EMBL-EBI] GO:0071495        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0101005        [VIEW IN EMBL-EBI] GO:0140096        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI] GO:1901700        [VIEW IN EMBL-EBI] GO:1901701        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGACTATGATGACTCCGCCTCCCGTCGATCAAGAGGATGAGGAGATGCTCGTGCCGCATTCTGATGTTGTCGACGGTCCTGCTCAGCCCATGGAAGTTTCTGAAGCTGAGACTGCTGTGAGTACTGTGGAGAATCAGCCAGCTGAGGAACCTCCCACGCTGAAATTCACGTGGACTATCCCAAACTTCTCTAGGCAAAACACCAGGAAGCTTTACTCTGATGTATTTGTCGTTGGAGGTTACAAATGGCGCATATTAATTTTCCCGAAAGGAAACAATGTTGACCACCTGTCCATGTACTTGGATGTTGCTGATGCTGCGAATTTGCCATATGGTTGGAGCCGTTACGCTCAGTTCAGTCTGGCTGTAGTCAATCAAATCCACACCAGATATACCATTAGAAAAGAGACGCAACATCAATTCAATGCTAGAGAAAGCGATTGGGGATTTACATCATTCATGCCGCTCAGCGAACTTTATGATCCTGGTAGAGGATATTTAGCGAATGATACTGTTTACGTTGAAGCCGAAGTCATTGTACGTAAGGTTCTTGATTACTGGTCATACGACTCTAAAAAAGAGACTGGTTTTGTTGGTCTCAAGAACCAAGGTGCAACTTGTTACATGAATTCTCTCCTACAGACGCTATACCACATACCTTACTTCAGAAAGGCTGTATACCACATGCCAACAACTGAGAACGATGCGCCAACAGCAAGTATACCTTTGGCTCTCCAAAGTTTGTTTTACAAGCTCCAGTATAACGACACTAGTGTTGCGACAAAAGAGCTGACAAAGTCGTTTGGTTGGGATACATATGATTCGTTCATGCAACATGATGTCCAAGAACTCAATCGAGTTCTATGTGAAAAACTTGAGGACAAAATGAAGGGAACTGTTGTGGAGGGAACAATACAACAGCTATTTGAGGGCCACCATATGAACTATATTGAGTGCATAAATGTAGATTACAAATCTACACGGAAAGAATCATTTTATGATCTTCAGTTGGATGTTAAAGGCTGCAAAGATGTTTATGCTTCTTTTGACAAATATGTTGAAGTTGAACGCCTTGAAGGAGACAACAAATATCATGCAGAAGGACATGGTTTACAGGATGCAAAAAAAGGTGTTCTTTTCATCGACTTTCCACCAGTTCTTCAGCTCCAGCTCAAGAGGTTTGAATATGACTTTATGAGGGACACCATGGTGAAGATAAATGACCGGTATGAGTTTCCTCTCCAATTGGATCTTGATAGAGAGGATGGGAAGTATTTATCCCCTGATGCTGACAGGAGTGTCCGCAACCTGTACACACTTCACAGTGTCTTAGTTCATAGTGGAGGAGTACATGGTGGGCACTATTACGCTTTTATAAGGCCCACGCTCTCAGATCAGTGGTATAAATTTGATGATGAACGAGTAACCAAGGAAGATTTGAAAAGGGCATTGGACGAGCAATATGGTGGTGAAGAAGAGCTACCACAGACTAATCCTGGTTTCAATAACCCGCCTTTCAAATTCACAAAGTACTCGAATGCATACATGCTTGTATATATCCGGGAAAGTGACAAAGATAAAATAATCTGCAACGTTGATGAGAAAGACATTGCTGAACATTTAAGGGTGAGGCTGAAGAAAGAACAAGAAGAAAAAGAAGATAAAAGAAAGTACAAGGCACAAGCTCACCTTTTTACGATAATTAAGGTTGCAAGAGATCAAGACCTCAGGGAACAAATTGGGAAGGATATATATTTTGATCTTGTTGATCATGACAAAGTTAGAAGTTTCCGGATCCAGAAACAGACGCCATTTCAACAATTTAAGGAGGAGGTGGCCAAAGAATTTGGTATACCTGTTCAGTTACAGAGGTTCTGGATTTGGGCAAAGCGACAAAATCATACTTATCGTCCCAATCGCCCACTTACTCCTCAGGAGGAATTACAACCGGTTGGACAAATAAGAGAAGCATCTAACAAGGCAAACACTGCAGAACTTAAGCTGTTTTTGGAAGTAGAGCTGCTGGATGAACGTCCTATTCCCCCTCCAGAAAAATCGAAAGAAGATATTCTTCTGTTCTTTAAGCTTTATGACCCCGAGAAGCCAGAGTTAAGGTATGTTGGCAGACTCATGGTGAAAAGTTCCAGCAAGCCTATGGATATAACTGGAAAATTGAATGAAATGGCTGGTTTTGCTCGTGATGAAGACTTGGAACTTTTTGAGGAAATCAAGTTCGAGCCTGGTGTTATGTGCGAACACCTGGATAAGAAAACTTCATTCAGATTGTGTCAAATCGAAGATGGAGATATCATTTGCTTTCAGAAACACCTTGTTAAGAAGGAGATTGAATGCCGCTACCCAGCTGTGCCTTTGTTTCTTGAATATGTCCAGAATCGGCAGCTGGTCCGATTTCGTGCTCTGGAAAAACCTAAAGAAGATGAATTTGTTCTGGAGTTGGCGAAGTTGCACACTTATGTCGATGTCGTGGAAAGAGTGGCCCAGAAGCTTGGTCTTGACGATCCATCCAAACTTAGGCTTACATCTCACAACTGCTATTCCCAGCAACCCAAGCCTCAGCCTATCAAATACCGTGGAGTAGACCGTCTGTCTGATATGTTAGTTCACTACAATCAGACGTCTGATATTTTGTATTATGAAGTTCTGGACATTCCTCTTCCAGAATTGCAAGGTCTTAAAACCTTGAAAGTTGCTTTCCATCATGCCACGAAGGAAGAAGTGGTAATCCACAATATCAGACTACCTAAACAAAGCACAGTCGGGGATGTTATTGATGAACTTAAAACAAAGGTGGAGCTTTCTCATCCAGATGCAGAACTGAGATTACTTGAGGTGTTTTACCACAAGATCTACAAGATTTTCCCCTTAACTGAAAGAATTGAGAATATAAACGATCAGTACTGGACTGTGCGAGCTGAGGAGATTCCGGAAGAAGAGAAGAATATTGGTCCAAATGATCGCTTAATTTTAGTGTACCACTTTGCTAAGGAGACTGGACAAAATCAGCAAGTGCAAAACTTTGGGGAGCCCTTCTTCTTGGTAATACATGAAGGTGAAACTCTTGAAGAAATCAAGAACCGTATCCAAAAGAAGCTTCATGTGTCCGATGAGGACTTTGCCAAGTGGAAGTTTGCGTTTATGTCAATGGGGCGTCCAGAGTACTTGCAGGACTCAGATGTTGTTTACAATCGCTTTCAGAGAAGAGATGTGTACGGTGCTTTTGAGCAGTACCTGGGGTTGGAGCACACTGATACCACTCCTAAGAGGGCTTATTCTGCTAACCAGAACCGGCACACTTATGAGAAGCCGGTTAAAATATACAACTAG

Protein:   MTMMTPPPVDQEDEEMLVPHSDVVDGPAQPMEVSEAETAVSTVENQPAEEPPTLKFTWTIPNFSRQNTRKLYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAANLPYGWSRYAQFSLAVVNQIHTRYTIRKETQHQFNARESDWGFTSFMPLSELYDPGRGYLANDTVYVEAEVIVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDREDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDLKRALDEQYGGEEELPQTNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRVRLKKEQEEKEDKRKYKAQAHLFTIIKVARDQDLREQIGKDIYFDLVDHDKVRSFRIQKQTPFQQFKEEVAKEFGIPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREASNKANTAELKLFLEVELLDERPIPPPEKSKEDILLFFKLYDPEKPELRYVGRLMVKSSSKPMDITGKLNEMAGFARDEDLELFEEIKFEPGVMCEHLDKKTSFRLCQIEDGDIICFQKHLVKKEIECRYPAVPLFLEYVQNRQLVRFRALEKPKEDEFVLELAKLHTYVDVVERVAQKLGLDDPSKLRLTSHNCYSQQPKPQPIKYRGVDRLSDMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATKEEVVIHNIRLPKQSTVGDVIDELKTKVELSHPDAELRLLEVFYHKIYKIFPLTERIENINDQYWTVRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQQVQNFGEPFFLVIHEGETLEEIKNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDSDVVYNRFQRRDVYGAFEQYLGLEHTDTTPKRAYSANQNRHTYEKPVKIYN